Alexandria 0.8.1

Personal library of scientific PDFs

filecart Linux Updated Oct 13, 2026
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About Alexandria

Alexandria is a application for managing a local store of scientific papers.
Typically starting with a directory of PDFs, it extracts metadata (title,
authors, year, DOI, journal) from the text of the PDF, consults CrossRef and
OpenAlex, then presents a searchable, filterable card browser.
Alexandria tries to make it easy to find and add related papers.

• Full-text search across title, authors, abstract, DOI and journal

• Citation counts and per-year sparklines from OpenAlex

• Built-in PDF viewer with highlight and comment annotations,
and click-through citation links that jump to the reference

• A viewer sidebar with the paper's table of contents, page
thumbnails and your highlights

• Structured full text (JATS XML) fetched from Europe PMC and
stored beside the PDF

• Authors window: a persistent trail of the authors you follow,
with their works, collaborators, funding and affiliation history

• Journal and topic subscriptions, flagging new papers by
authors you have looked up before

• BibTeX, RIS and CSL export; BibTeX and DOI import

• Preprint detection (arXiv, bioRxiv, chemRxiv and more)

• Duplicate detection by DOI and file hash, with supporting
information recognised as belonging to its parent paper

• An MCP server, so an AI assistant you already use can search
and read your library — no model or API key inside the app

• Sidecar JSON metadata lives next to each PDF - so it's easily
transportable

License: GPL-3.0-or-later
Release info Update on Oct 11, 2026
Release notes Release Notes for 0.8.1

o FEATURE: Live BibTeX export. Point Preferences -> Live BibTeX at
the .bib file your LaTeX document cites, and Alexandria
rewrites it whenever the library changes, so \cite{}
works without remembering to export first. The whole file
is rewritten rather than appended to, so a correction
made in the Edit dialog reaches an entry already written.
It is left alone when its contents would not change, so
latexmk -pvc does not rebuild in a loop, and it is
replaced in one step, so LaTeX never reads half a file.
A file you have since edited by hand is not overwritten:
it says so, and asks you to choose it again if you meant
to replace it. Contributed by Jordan Dialpuri.

o FEATURE: Follow arXiv categories. Add... -> arXiv, and tick as
many of the 155 categories as you read, grouped by
archive. Each keeps its own feed, and a paper
cross-listed into two categories appears under both,
because that is information rather than a duplicate.
Revised versions of papers already announced are left
out, which is about half of a typical category. arXiv
announces once each weekday, so nothing arrives at a
weekend. Rows come complete from the feed - title,
authors, abstract, DOI and date - with no further
lookups.

o BUG-FIX: Clicking an author sometimes did nothing. An optional
cache write part way through building the page could
fail, and then everything after it - the histogram, the
affiliations, the whole profile pane - never ran. It
looked like the window failing to open, with the reason
visible only in the terminal.

o BUG-FIX: A paper with no authors offered a menu button that
opened an empty list. The button is left out instead.

o BUG-FIX: A PDF's own title is written by whatever laid the page
out, and for scans and typeset proofs it is often a
production artefact rather than the name of the paper.
Watson and Crick (Nature, 1953) asserts
"171-4356indd.indd", and 4 of 19 PDFs in a real library
carried a typesetter's page marker such as
"jm6c00865 1..15"…
Related tags pdf papers research
Listing dataFlathub

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